Scleroderma – Expression Table

Table 2 Normalized Log-Transformed Gene Expressions for Significant Genes

  Experiment control1 control2 control3 control4 control5 twin12 twin23 twin24 twin37 twin64 twin17 twin20 twin21 twin27 twin30 twin34 twin4 twin44 twin49 twin50 twin59 twin62 twin63 twin65 twin69
  Class Norm Norm Norm Norm Norm Norm Norm Norm Norm Norm SSc SSc SSc SSc SSc SSc SSc SSc SSc SSc SSc SSc SSc SSc SSc
1 H015502_01 0.501 1.872 1.674 0.616 1.163 0.796 0.505 0.759 0.093 0.15 -0.537 -0.228 -0.491 -0.906 -0.429 -0.337 -0.485 0.118 -1.321 -0.76 -0.538 0.903 -0.896 0.209 -0.162
2 H007802_01 -0.467 0.041 1.499 -1.238 0.158 -1.875 -1.979 0.675 -1.759 -0.619 -4.07 -2.661 -2.955 -4.006 -2.733 -2.977 -2.14 -2.744 -2.795 -0.265 -3.866 -0.419 -1.62 -3.799 -2.724
3 H006006_01 -0.424 -1.142 -1.725 -0.309 -0.076 -3.685 -3.321 -0.104 -5.644 -3.844 -5.977 -3.163 -3.556 -3.993 -5.445 -5.465 -4.36 -4.272 -5.175 -3.786 -4.545 -1.498 -4.405 -4.543 -4.541
4 H009251_01 1.593 0.056 0.217 0.943 -0.538 -1.134 0.029 0.643 1.401 -0.152 -1.041 -0.627 -0.503 -0.913 -0.453 -0.834 -0.465 -1.247 -0.45 -0.694 -0.049 -0.475 -1.257 -1.932 -1.154
5 H001615_01 2.42 0.884 0.727 1.525 0.924 0.693 0.894 1.881 0.406 0.682 0.683 0.564 0.642 -0.287 -0.196 0.142 0.155 0.253 0.072 0.665 0.033 0.732 -0.15 -0.575 -0.807
6 H007811_01 1.663 -0.064 -1.064 1.853 1.299 -0.461 -0.557 1.847 -0.65 -1.276 -1.243 -0.19 -0.702 -1.777 -1.771 -1.19 -1.667 -1.191 -1.38 -1.063 -1.347 -0.025 -1.306 -0.723 -1.96
7 H002995_01 2.183 5.307 4.665 1.812 1.672 4.699 2.674 3.199 4.153 3.567 3.187 2.957 2.078 0.161 1.071 1.345 1.532 3.306 0.41 1.828 1.345 1.63 1.489 2.54 0.653
8 H006223_01 -0.032 0.375 0.906 -0.279 -0.098 0.161 0.373 2.106 0.067 1.14 -0.908 -0.185 -0.139 -0.107 -0.747 -0.465 -0.764 -0.032 -0.13 -0.354 -0.542 -0.613 -0.996 -0.634 -0.081
9 H012558_01 -0.308 0.267 -0.311 -0.332 0.145 -1.312 -0.266 0.064 -0.802 -1.518 -1.076 -1.19 -1.316 -1.659 -1.319 -1.661 -1.469 -0.787 -0.927 -1.327 -0.723 -2.623 -1.718 -1.008 -2.495
10 H002764_01 -0.747 1.865 0.508 1.97 1.191 0.84 0.179 1.261 0.048 0.47 NA 0.248 -0.267 0.289 -0.602 -0.089 -0.323 -1.235 -0.264 -0.098 -0.314 -0.453 -0.261 NA 0.161
11 H009598_01 -0.364 0.368 1.755 0.58 0.474 -0.906 -0.101 -0.253 0.449 -0.899 -0.482 -0.755 -1.272 -1.294 -0.818 -1.369 -1.859 -1.268 -0.934 -1.119 -0.62 -1.325 0.043 -0.722 -0.113
12 H007570_01 1.231 1.118 1.397 1.543 0.992 0.18 1.213 1.143 -0.14 0.377 -1.242 0.501 0.049 -0.512 -0.344 0.263 -0.011 -0.057 0.473 -0.994 0.945 0.757 0.046 -0.56 -0.519
13 H013222_01 1.231 0.919 -0.302 0.778 -1.446 -0.48 -0.992 -0.129 -0.416 -1.367 -1.294 -1.11 -1.23 -1.212 -1.835 -1.985 -1.785 -0.593 -0.728 -1.283 -2.019 -1.103 -0.83 -0.756 -2.57
14 H011937_01 1.48 1.692 1.041 1.691 1.783 -0.193 1.37 -0.068 1.57 -0.656 NA 0.587 0.193 -0.449 -0.558 0.297 -0.386 -0.274 0.202 -0.354 -0.321 1.082 -0.313 -1.864 -0.82
15 H001924_01 -1.496 -0.89 0.408 0.592 -0.283 3.351 2.896 1.143 3.719 4.088 4.495 3.356 3.103 3.152 2.747 4.384 4.555 3.969 3.136 3.896 4.423 NA 3.41 4.079 4.864
16 H014431_01 -0.973 0.064 -1.211 -0.373 0.072 1.074 0.247 0.499 0.817 0.383 0.976 1.228 1.38 1.297 1.361 1.347 1.35 0.739 1.197 1.39 1.116 1.074 0.317 2.255 1.331
17 H015129_01 -1.509 -0.936 0.13 -0.783 -0.177 -1.297 0.582 -2.054 -0.384 0.388 -0.388 0.68 0.43 1.117 1.162 1.465 0.05 1.448 1.173 0.294 0.996 0.167 0.956 1.097 0.648
18 H003695_01 -0.817 -0.191 1.174 1.476 1.775 0.978 2.076 1.918 2.067 2.473 1.837 1.621 2.614 4.015 3.446 3.166 2.379 2.178 2.038 2.915 3.669 3.949 3.967 3.398 4.26
19 H013132_01 -0.216 -1.749 -0.21 -0.296 NA -1.337 -0.837 -0.316 -1.213 -0.262 1.271 0.129 0.701 0.289 0.347 0.405 0.157 0.671 -0.352 0.923 0.178 -0.006 -0.343 NA -0.319
20 H003853_01 -0.919 -0.959 0.214 -1.295 -0.341 2.65 3.493 -0.445 3.436 3.031 4.173 1.583 3.548 3.868 2.725 4.264 2.939 3.754 2.97 2.975 4.574 0.518 4.311 3.483 4.505
21 H002800_01 0.001 2.284 -0.337 3.973 1.929 -0.43 2.766 1.307 2.69 2.132 1.663 1.843 4.517 4.236 4.847 3.252 3.18 2.85 3.922 2.417 4.811 4.569 3.553 6.261 5.535
22 H010437_01 -0.272 0.952 0.745 NA -1.136 0.799 -1.053 0.295 1.559 1.096 3.028 0.365 2.134 2.951 2.437 3.073 1.024 2.21 2.248 1.513 3.665 -0.744 2.384 2.066 4.017
23 H003218_01 1.064 3.465 1.526 -0.389 1.538 1.545 3.48 0.231 3.486 1.099 3.861 3.48 3.373 4.106 4.466 4.989 1.953 2.419 3.7 3.967 3.579 5.463 1.574 3.429 3.423
24 H000365_01 -1.334 -0.714 -0.994 -2.159 -1.657 -0.761 -0.396 -1.482 -0.21 -0.186 0.358 -0.286 -0.382 0.211 0.12 0.229 -0.63 -0.454 0.029 -0.066 -0.275 -0.133 0.366 -0.234 -0.257
25 H002448_01 -0.514 -0.775 -0.845 -2.039 -0.342 -0.091 -0.403 -1.762 0.321 -0.056 NA 0.269 0.099 0.931 0.122 -0.574 1.668 0.272 0.389 1.239 0.113 -0.075 1.413 1.967 0.188
26 H007495_01 -1.773 -2.85 -3.424 -1.918 -2.537 -2.657 -3.325 -2.532 -1.777 -1.972 -1.005 -2.021 -0.841 -1.526 -0.577 -1.431 -1.712 -2.231 -0.858 -1.523 -2.466 -1.917 -1.604 -0.276 -1.229
27 H013988_01 0.501 1.346 -0.273 -1.719 0.437 3.438 3.192 -0.985 3.193 3.225 4.113 1.2 3.202 2.604 3.396 4.329 2.633 3.85 2.158 3.273 4.063 3.437 3.017 3.917 4.583
28 H002144_01 -0.117 -0.01 -0.923 0.252 -0.645 2.289 2.232 0.504 1.762 2.432 1.91 1.287 2.12 2.89 2.637 2.004 2.629 1.939 2.522 2.333 2.925 0.992 1.636 2.241 2.996
29 H004244_01 -0.748 -1.271 -0.767 -0.721 -1.84 0.169 0.45 0.69 -1.026 1.565 0.668 0.688 1.189 1.713 2.081 0.177 0.613 -0.246 1.188 1.238 1.845 1.234 1.571 0.481 -0.02
30 H015287_01 -2.164 -1.081 -1.62 -1.488 -0.084 0.798 -0.654 0.82 0.706 0.995 NA 0.696 1.335 0.856 -0.593 1.43 1.809 1.046 1.534 0.975 0.451 0.845 0.46 1.132 1.429
31 H008600_01 -0.787 0.296 -0.389 0.158 0.908 1.891 -0.354 -0.02 0.466 1.033 0.33 0.609 1.619 0.768 2.543 2.089 2.2 2.048 1.899 2.573 2.252 1.643 0.295 2.29 0.63
32 H014653_01 -1.38 0.388 -0.485 -0.309 0.752 -0.057 -0.384 -0.176 0.42 -0.451 0.575 0.535 0.733 1.054 1.467 0.901 -0.48 0.576 0.993 0.359 1.567 0.531 0.324 1.585 1.078
33 H004727_01 1.087 0.411 0.242 0.41 1.549 3.07 3.213 0.427 3.913 4.026 4.348 1.963 3.961 3.116 3.623 4.191 4.271 3.672 2.651 3.83 3.803 1.371 4.249 4.314 4.284
34 H008649_01 -1.484 -0.012 -0.344 -1.086 -0.181 -1.188 -0.031 -0.957 0.143 0.125 0.865 0.091 0.169 -0.004 0.301 0.03 -0.205 0.024 0.546 0.063 0.183 0.713 0.98 0.717 0.479
35 H003072_01 -2.689 2.723 1.353 2.957 3.125 2.052 2.03 -0.27 1.747 2.416 2.727 3.354 3.166 3.248 3.072 3.192 2.315 3.458 2.544 2.175 4.04 4.029 3.572 4.219 4.221
36 H007489_01 1.143 -0.741 -0.273 -2.084 0.318 1.922 3.532 -1.282 2.295 3.266 3.197 1.281 2.327 3.969 2.615 3.725 2.975 3.144 3.268 1.743 3.155 -0.023 3.67 4.055 4.444
37 H001445_01 0.934 0.097 -0.67 -0.549 -0.553 -1.312 -0.238 NA -1.159 -1.294 NA -0.217 -0.262 0.468 -0.25 1.336 0.152 0.158 0.458 0.889 0.574 0.809 0.114 0.84 0.386
38 H008524_01 -2.123 -2.586 -4.135 -3.425 -2.644 0.286 -0.616 -2.733 0.878 0.696 -0.66 -0.075 -0.402 1.558 0.369 0.954 0.854 0.843 0.386 0.144 0.312 -2.79 0.209 1.542 1.235
39 H006619_01 0.574 -0.39 -0.832 2.397 1.352 1.782 3.703 3.232 4.524 2.319 1.444 3.735 3.814 4.009 3.473 2.761 4.788 4.254 4.512 3.214 3.234 3.272 2.811 4.995 5.561
40 H009480_01 0.277 1.977 -0.494 0.934 1.269 -1.226 -0.09 1.683 0.07 0.966 0.267 0.035 2.503 2.76 2.365 2.353 0.979 1.649 1.385 1.244 3.569 1.775 2.699 2.849 3.87
41 H008112_01 -0.569 -0.074 -1 -0.36 -1.545 0.846 0.78 -1.3 0.048 0.447 2.923 0.45 0.961 2.75 1.112 -0.22 1.469 1.094 0.433 1.07 1.865 -0.574 1.887 -0.517 1.807
42 H000408_01 0.774 -0.712 -0.672 0.73 1.321 2.567 0.718 -0.202 0.888 1.234 1.385 0.248 3.09 3.305 2.206 2.693 2.589 3.789 3.721 1.056 2.518 -0.088 2.628 5.211 1.097
43 H005913_01 1.605 1.99 -1.114 1.154 -0.605 2.862 4.023 0.011 4.011 3.633 4.127 3.52 3.91 3.309 3.797 4.547 3.939 3.267 2.31 3.727 3.797 0.898 4.308 3.449 4.995
44 H014899_01 -0.728 -0.51 -1.049 -2.432 -1.129 0.155 -1.63 -1.551 -0.542 1.562 NA 0.211 -0.149 1.013 0.253 0.413 0.715 -0.724 0.042 0.439 1.913 -0.482 1.921 0.349 0.546
45 H000899_01 -0.462 0.613 -0.923 -0.799 0.917 3.858 3.824 0.062 3.879 3.951 3.974 2.262 4.268 4.085 4.009 4.871 4.059 4.251 3.391 4.009 4.392 -0.32 3.539 2.661 4.886
46 H002468_01 -1.534 -2.338 -0.457 -0.813 -1.459 1.81 -0.022 -0.281 1.298 -2.706 NA 0.616 -0.098 1.34 0.324 0.868 1.302 0.843 0.348 1.594 1.82 -0.594 0.271 0.454 3.334
47 H006032_01 -0.861 -1.31 -0.535 0.342 -0.984 0.241 -0.055 -0.484 -0.029 -0.558 -0.7 0.947 0.597 1.144 0.065 2.493 0.605 1.472 1.779 0.328 0.469 -0.801 -0.216 1.488 0.612
48 H012790_01 -0.544 1.875 0.728 -0.553 1.55 3.177 3.494 -0.666 1.988 0.935 3.035 0.777 3.74 3.369 3.154 3.696 1.913 3.864 2.51 2.846 4.06 -0.276 3.086 4.806 4.901
49 H016173_01 -0.277 0.407 0.25 1.137 0.701 0.179 0.504 0.745 0.726 0.3 1.12 0.924 0.87 1.442 0.877 1.378 0.834 0.653 1.276 0.79 1.916 3.262 1.34 1.94 1.174
50 H005487_01 -0.926 0.12 0.29 0.653 1.956 4.023 4.325 -0.427 4.028 3.919 4.097 1.835 4.696 4.455 4.008 4.948 4.712 3.608 3.217 4.097 5.509 -0.208 4.036 4.662 5.156
51 H009379_01 -0.408 0.128 0.38 0.562 1.473 1.306 1.627 0.759 1.921 2.105 2.087 0.843 2.047 2.037 1.78 1.879 1.808 1.749 1.946 1.996 2.633 0.665 2.505 2.383 2.869
52 H009493_01 -0.272 -0.332 -0.076 -1.777 -0.988 3.07 2.845 -1.098 3.224 3.362 3.386 1.971 1.632 4.175 3.067 3.252 2.479 3.342 2.796 2.195 2.257 -0.504 3.591 3.012 4.236
53 H008340_01 -0.071 0.442 -0.57 -0.363 1.072 1.574 1.267 0.021 1.35 1.4 1.968 0.961 0.03 3.311 2.047 0.846 1.239 1.667 2.322 1.28 2.572 0.969 1.962 2.524 2.157
54 H002024_01 -0.388 -1.426 -1.312 -1.73 -1.239 -0.404 -1.432 -0.839 -0.904 0.273 NA -0.085 -0.747 0.845 0.209 -0.95 -0.313 -1.646 0.228 0.851 0.208 -0.363 0.595 0.576 0.644
55 H001149_01 2.215 2.296 1.48 1.692 1.172 2.347 1.975 1.489 2.884 2.371 3.099 2.16 2.936 2.855 3.046 2.816 1.124 2.531 2.845 2.791 3.522 3.003 2.995 2.919 3.164
56 H012306_01 -0.949 2.239 0.868 -0.345 0.359 3.865 3.708 -0.343 3.798 3.483 3.806 1.704 4.114 2.732 3.758 4.399 4.133 3.404 2.544 4.098 4.329 0.644 4.216 4.048 4.566
57 H011917_01 -0.612 0.203 0.942 -1.017 0.7 0.389 0.115 -0.746 1.157 0.253 1.121 0.913 1.345 1.048 0.855 0.975 0.037 1.614 0.504 0.648 0.513 1.54 1.296 0.616 1.343
58 H000555_01 -0.898 0.492 -0.449 -0.296 0.975 4.097 4.181 1.906 4.618 4.212 3.909 4.12 4.741 3.732 4.106 4.708 4.673 3.805 2.786 4.445 4.347 0.311 4.012 3.044 5.165
59 H005176_01 0.167 -2.558 -0.006 -2.309 -0.733 0.678 2.282 -0.147 1.321 1.374 NA 0.512 0.93 2.646 1.917 0.195 1.895 1.401 2.768 0.955 1.866 -0.665 3.041 NA 3.994
60 H000168_01 -0.578 0.427 -1.243 -0.683 0.332 0.186 0.8 -0.497 1.146 -0.648 2.978 1.164 0.488 1.153 0.689 0.432 1.927 0.974 0.223 1.516 0.881 0.474 0.765 0.23 0.129
61 H004056_01 -1.169 -0.321 -1.595 0.797 3.163 3.309 3.823 0.453 3.201 2.304 3.784 1.962 4.393 4.164 3.668 3.867 3.745 4.221 3.18 2.852 4.728 -0.52 2.761 4.334 2.491
62 H001113_01 -1.725 -0.807 -0.892 -0.591 -0.936 -0.285 -0.133 -0.818 -1.172 0.6 -0.66 -0.833 -0.783 0.978 1.444 -0.715 1.074 0.904 -0.246 0.552 1.724 0.333 0.481 2.176 -0.123
63 H001752_01 -1.41 -1.015 -1.031 -0.775 -1.311 -0.101 -0.483 -0.625 -0.62 0.145 -0.792 -0.162 -0.376 0.963 -0.502 -0.269 1.376 1.129 0.127 0.948 0.6 0.114 0.943 0.891 -1.511
64 H000456_01 -0.661 -1.392 -1.203 0.457 -0.57 0.058 0.07 0.247 0.076 0.179 -0.968 0.115 0.408 2.291 0.524 1.271 1.109 -0.893 1.694 1.122 0.367 1.349 0.97 0.508 2.196
65 H004028_01 -0.808 -0.503 -0.5 -0.431 0.556 -0.82 0.497 -0.237 0.465 0.443 1.332 0.054 0.905 0.962 0.284 0.173 2.074 0.507 -0.119 1.289 2.611 -0.589 0.887 0.971 1.182
66 H010888_01 -1.122 -0.695 -2.046 -0.599 -0.232 -0.356 -0.181 -0.713 0.021 0.501 -0.685 0.081 0.614 1.799 0.88 -0.271 0.815 0.889 0.441 -0.329 0.006 -0.594 0.406 1.151 0.393
67 H003699_01 -0.117 -1.35 0.012 -1.46 NA 2.268 0.142 -1.08 0.641 0.786 NA 0.008 0.277 2.265 2.278 2.064 1.478 3.314 0.011 2.075 2.658 -0.816 1.746 -0.118 4.219
68 H006665_01 -1.088 -0.432 -1.059 -1.234 -1.015 -1.364 -0.735 -1.399 -0.404 -0.268 -0.317 -0.775 -0.377 -0.652 0.022 -0.567 -0.443 -0.457 -0.212 -0.334 -0.753 -0.281 -0.055 0 -0.208
69 H014475_01 -0.799 -1.928 0.493 -0.832 0.163 0.069 -0.015 0.134 0.159 0.446 -0.262 0.604 1.085 1.114 0.565 -0.048 0.889 0.993 0.895 0.105 0.818 0.967 0.276 0.19 0.714
70 H005180_01 -0.242 -1.173 -2.348 -0.609 -0.8 -0.149 2.308 0.032 0.992 1.549 NA 0.999 1.165 2.167 0.47 1.595 2.508 0.427 1.296 1.234 0.15 1.096 1.647 0.273 1.625
71 H002915_01 -0.431 1.064 -0.521 1.802 1.983 -0.314 0.382 0.494 0.178 3.008 2.334 0.365 0.318 3.208 1.882 4.267 2.483 3.313 0.364 1.819 2.753 2.123 3.678 1.14 3.219
72 H003496_01 -1.092 -0.653 -0.683 0.223 -0.31 0.284 -0.065 1.33 -0.279 1.152 1.581 0.523 0.95 0.622 0.866 0.177 1.133 1.279 0.127 0.622 0.449 0.848 0.441 1.031 1.27
73 H000277_01 -1.256 0.538 1.538 0.006 0.33 0.377 1.167 -0.722 0.419 0.573 0.959 0.771 0.342 2.524 2.422 1.04 1.301 0.95 1.527 -0.44 1.984 1.276 1.749 1.167 2.911
74 H000192_01 -0.666 -1.705 -0.514 -0.606 -1.326 -0.484 -1.375 -0.223 -0.23 -0.241 -0.601 -0.547 0.079 -0.187 0.631 -1.066 0.322 0.083 0.609 0 -0.506 1.245 0.817 0.091 -0.149
75 H004497_01 -1.755 -1.043 -0.89 -2.399 -2.423 -2.231 -1.478 -1.188 -1.144 -0.952 -0.697 -0.821 -0.983 -0.374 -1.007 -0.832 -1.255 -1.269 -1.123 -0.782 -0.948 -1.126 -0.521 -1.278 -0.432
76 H010386_01 2.843 3.162 1.124 0.785 3.24 4.053 3.687 -0.913 4.27 3.591 3.855 4.62 4.381 2.25 3.765 4.435 4.144 3.839 2.566 3.842 4.528 5.317 4.974 3.577 4.476
77 H010247_01 -1.007 1.228 1.337 -0.505 1.083 2.872 2.291 -0.006 2.603 2.284 2.286 1.383 1.901 4.076 3.158 2.884 3.168 2.523 2.866 1.361 2.619 0.661 3.004 2.682 3.279
78 H004407_01 -0.706 -0.801 0.059 -0.851 -1.833 -0.735 -0.047 -0.801 -0.371 0.12 1.201 0.305 -0.013 0.019 -0.785 -0.317 1.157 -0.154 0.777 0.391 -0.315 0.083 0.081 -0.349 0.614
79 H007580_01 -0.232 -0.851 -1 0.77 -1.154 -0.049 0.373 0.025 -0.824 -0.428 NA 0.268 0.65 1.232 0.12 0.811 -0.009 -0.003 0.74 0.935 1.361 0.155 -0.112 -0.613 0.68
80 H010823_01 -1.529 0.331 0.754 -1.125 0.25 2.736 4.129 -0.923 2.453 1.904 2.743 1.569 1.49 3.421 3.573 3.021 3.725 3.415 3.515 2.705 3.351 -1.627 2.882 3.549 3.089
81 H001268_01 -1.191 0.155 -0.962 -0.766 1.17 1.328 2.09 1.497 0.002 0.695 3.353 1.184 2.459 2.087 0.908 3.072 1.187 2.749 0.659 1.062 1.734 0.336 1.258 0.613 1.709