SAM (Significance Analysis of Microarray) Results
Description of the problem:
Number of classes: 2
Number of genes: 12776
Number of genes that passed filtering criteria: 8324
Type of test used: SAM – Significance analysis of Microarray
Column of the Experiment Descriptors sheet that defines class variable : GROUP
Genes which discriminate among classes:
Table 1
There are 166 genes significant by SAM
The median false discovery rate among the 166 significant genes is 0.08539
The delta value used to identify the significant genes is 0.59305
The fudge factor for standard deviation is computed as 0.03459
| Geometric mean of ratios ( Disease / Normal ) |
Qiagen oligo ID | Description | GB acc | UG cluster | Gene symbol | |
|---|---|---|---|---|---|---|
| 1 | 1.553 | H002655_01 | Collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic, dominant and recessive) | L02870 (external link) | 1640 | COL7A1 (external link) |
| 2 | 1.453 | H007688_01 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 | AF109735 (external link) | 195471 | PFKFB3 (external link) |
| 3 | 1.757 | H002994_01 | Collagen, type XVIII, alpha 1 | AF018081 (external link) | 78409 | COL18A1 (external link) |
| 4 | 1.689 | H016341_01 | Platelet derived growth factor C | NM_016205 (external link) | 43080 | PDGFC (external link) |
| 5 | 1.422 | H006183_01 | Metallothionein 1X | X65607 (external link) | 278462 | MT1X (external link) |
| 6 | 1.251 | H011854_01 | Heterogeneous nuclear ribonucleoprotein C (C1/C2) |
M16342 (external link) | 182447 | HNRPC (external link) |
| 7 | 1.352 | H000498_01 | Desmoplakin (DPI, DPII) | AL031058 (external link) | 74316 | DSP (external link) |
| 8 | 1.249 | H003776_01 | Aldehyde dehydrogenase 2 family (mitochondrial) |
X05409 (external link) | 195432 | ALDH2 (external link) |
| 9 | 1.436 | H012791_01 | Metallothionein 1A (functional) | K01383 (external link) | 203967 | MT1A (external link) |
| 10 | 1.314 | H003383_01 | Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) |
Z82188 (external link) | 173466 | RAC2 (external link) |
| 11 | 1.66 | H015187_01 | Homo sapiens clone N97 immunoglobulin heavy chain variable region mRNA, partial CDS |
AF103295 (external link) | 283882 | |
| 12 | 1.483 | H008423_01 | EH-domain containing 3 | NM_014600 (external link) | 87125 | EHD3 (external link) |
| 13 | 1.333 | H007009_01 | Fibroblast growth factor receptor-like 1 |
AK000530 (external link) | 193326 | FGFRL1 (external link) |
| 14 | 1.23 | H000238_01 | KRAB associated protein 1 | X97548 (external link) | 228059 | TIF1B (external link) |
| 15 | 1.386 | H011703_01 | Hypothetical protein FLJ20364 | AK000371 (external link) | 32471 | FLJ20364 (external link) |
| 16 | 1.292 | H014948_01 | Phosphatidylglycerophosphate Synthase |
NM_024419 (external link) | 278682 | PGS1 (external link) |
| 17 | 1.375 | H006492_01 | Homo sapiens CD44 isoform RC (CD44) mRNA, complete CDS |
AF098641 (external link) | 306278 | |
| 18 | 1.374 | H012664_01 | metallothionein 1B (functional) | M13485 (external link) | 211924 | MT1B (external link) |
| 19 | 1.292 | H006579_01 | Hypothetical protein FLJ10292 | AK001154 (external link) | 104650 | FLJ10292 (external link) |
| 20 | 1.427 | H008064_01 | KIAA0008 gene product | D13633 (external link) | 77695 | KIAA0008 (external link) |
| 21 | 1.255 | H012398_01 | KIAA1118 protein | AB029041 (external link) | 209646 | KIAA1118 (external link) |
| 22 | 1.451 | H003725_01 | Cartilage oligomeric matrix protein (pseudoachondroplasia, epiphyseal dysplasia 1, multiple) |
AC003107 (external link) | 1584 | COMP (external link) |
| 23 | 1.211 | H011172_01 | Heat shock protein 75 | NM_016292 (external link) | 182366 | TRAP1 (external link) |
| 24 | 1.243 | H009594_01 | Neuropathy target esterase | AJ004832 (external link) | 5038 | NTE (external link) |
| 25 | 1.445 | H008685_01 | Metallothionein 2A | V00594 (external link) | 118786 | MT2A (external link) |
| 26 | 1.279 | H007583_01 | Kinesin family member 4A | AF071592 (external link) | 279766 | KIF4A (external link) |
| 27 | 1.367 | H013251_01 | KIAA1329 protein | AB037750 (external link) | 21061 | KIAA1329 (external link) |
| 28 | 1.189 | H015295_01 | Homo sapiens HSPC337 mRNA, partial CDS |
AF161451 (external link) | 284295 | |
| 29 | 1.5 | H011653_01 | Vanilloid receptor-like protein | NM_016113 (external link) | 300686 | VRL (external link) |
| 30 | 1.405 | H012717_01 | Metallothionein 1F (functional) | M10943 (external link) | 203936 | MT1F (external link) |
| 31 | 1.193 | H003987_01 | PRO0659 protein | NM_014138 (external link) | 6451 | PRO0659 (external link) |
| 32 | 1.415 | H009923_01 | Vanilloid receptor-like protein 1 | NM_015930 (external link) | 279746 | VRL-1 (external link) |
| 33 | 1.313 | H016122_01 | TMTSP for transmembrane molecule with thrombospondin module |
NM_018676 (external link) | 325667 | LOC55901 (external link) |
| 34 | 1.244 | H012710_01 | Hepatitis delta antigen-interacting protein A |
U63825 (external link) | 66713 | DIPA (external link) |
| 35 | 0.621 | H003528_01 | Decay accelerating factor for complement (CD55, Cromer blood group system) |
M30142 (external link) | 1369 | DAF (external link) |
| 36 | 0.548 | H003827_01 | Serum/glucocorticoid regulated kinase |
AJ000512 (external link) | 296323 | SGK (external link) |
| 37 | 0.548 | H016371_01 | Hypothetical protein FLJ21212 | NM_024642 (external link) | 47099 | FLJ21212 (external link) |
| 38 | 0.584 | H009347_01 | Neuronal cell adhesion molecule | AB002341 (external link) | 7912 | NRCAM (external link) |
| 39 | 0.465 | H001509_01 | Aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) |
D17793 (external link) | 78183 | AKR1C3 (external link) |
| 40 | 0.517 | H003858_01 | Aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-a |
U05598 (external link) | 201967 | AKR1C2 (external link) |
| 41 | 0.62 | H010655_01 | Hypothetical protein FLJ20546 | AK000953 (external link) | 279896 | FLJ20546 (external link) |
| 42 | 0.811 | H005438_01 | Homo sapiens mRNA; cDNA DKFZp434B1620 (from clone DKFZp434B1620) | AL137548 (external link) | 43112 | |
| 43 | 0.728 | H004078_01 | Heme-binding protein | NM_015987 (external link) | 108675 | HEBP (external link) |
| 44 | 0.708 | H002860_01 | Inositol polyphosphate-1-phosphatase |
L08488 (external link) | 32309 | INPP1 (external link) |
| 45 | 0.768 | H002574_01 | Alcohol dehydrogenase 5 (class III), chi polypeptide |
M81118 (external link) | 78989 | ADH5 (external link) |
| 46 | 0.751 | H004767_01 | Tetraspan 3 | AK001326 (external link) | 100090 | TSPAN-3 (external link) |
| 47 | 0.629 | H010640_01 | Homo sapiens mRNA; cDNA DKFZp434B1272 (from clone DKFZp434B1272); partial CDS |
AL162032 (external link) | 158258 | |
| 48 | 0.689 | H000959_01 | Glycophorin C (Gerbich blood group) |
NM_002101 (external link) | 81994 | GYPC (external link) |
| 49 | 0.721 | H003965_01 | Cellular repressor of E1A-stimulated genes |
AF084523 (external link) | 5710 | CREG (external link) |
| 50 | 0.724 | H002462_01 | Receptor tyrosine kinase-like orphan receptor 1 |
M97675 (external link) | 274243 | ROR1 (external link) |
| 51 | 0.664 | H007733_01 | Retinal short-chain dehydrogenase/reductase retSDR3 |
NM_016246 (external link) | 18788 | LOC51171 (external link) |
| 52 | 0.771 | H016494_01 | Hypothetical protein FLJ12436 | NM_024661 (external link) | 69485 | FLJ12436 (external link) |
| 53 | 0.742 | H008089_01 | KIAA0469 gene product | AB007938 (external link) | 7764 | KIAA0469 (external link) |
| 54 | 0.631 | H007034_01 | Histamine N-methyltransferase | U44111 (external link) | 81182 | HNMT (external link) |
| 55 | 0.706 | H000410_01 | A kinase (PRKA) anchor protein (gravin) 12 |
U81607 (external link) | 788 | AKAP12 (external link) |
| 56 | 0.702 | H001356_01 | KIAA0537 gene product | AB011109 (external link) | 200598 | KIAA0537 (external link) |
| 57 | 0.538 | H001341_01 | Platelet-derived growth factor receptor-like |
D37965 (external link) | 170040 | PDGFRL (external link) |
| 58 | 0.815 | H002021_01 | V-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein G |
AF059195 (external link) | 252229 | MAFG (external link) |
| 59 | 0.592 | H010453_01 | 3-alpha hydroxysteroid dehydrogenase type IIb |
NM_016253 | 279801 | LOC51708 (external link) |
| 60 | 0.685 | H005634_01 | Solute carrier family 11 (proton-coupled divalent metal ion transporters), member 3 |
NM_014585 (external link) | 5944 | SLC11A3 (external link) |
| 61 | 0.68 | H008745_01 | Acid sphingomyelinase-like phosphodiesterase |
AK000184 (external link) | 42945 | ASM3A (external link) |
| 62 | 0.704 | H003219_01 | Glutathione S-transferase M3 (brain) |
AF043105 (external link) | 2006 | GSTM3 (external link) |
| 63 | 0.773 | H003951_01 | Predicted osteoblast protein | D87120 (external link) | 29882 | GS3786 (external link) |
| 64 | 0.735 | H001047_01 | Nidogen 2 | AB009799 (external link) | 82733 | NID2 (external link) |
| 65 | 0.792 | H002382_01 | Limbic system-associated membrane protein |
U41901 (external link) | 26479 | LSAMP (external link) |
| 66 | 0.623 | H016583_01 | 1,2-alpha-mannosidase IC | NM_020379 (external link) | 8910 | HMIC (external link) |
| 67 | 0.742 | H011191_01 | Lipin 2 | D87436 (external link) | 166318 | LPIN2 (external link) |
| 68 | 0.803 | H002185_01 | Niemann-Pick disease, type C1 | AF002020 (external link) | 76918 | NPC1 (external link) |
| 69 | 0.775 | H000509_01 | Neural precursor cell expressed, developmentally down-regulated 4 |
D42055 (external link) | 1565 | NEDD4 (external link) |
| 70 | 0.786 | H007419_01 | Progesterone membrane binding protein |
AJ002030 (external link) | 9071 | PMBP (external link) |
| 71 | 0.774 | H002121_01 | Paraoxonase 2 | AF001601 (external link) | 169857 | PON2 (external link) |
| 72 | 0.805 | H008087_01 | HSPC019 protein | NM_014028 (external link) | 163724 | HSPC019 (external link) |
| 73 | 0.696 | H002393_01 | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C |
AB000220 (external link) | 171921 | SEMA3C (external link) |
| 74 | 0.785 | H014975_01 | Homo sapiens mRNA; cDNA DKFZp564N1272 (from clone DKFZp564N1272); complete CDS |
AF087847 (external link) | 282654 | |
| 75 | 0.614 | H001215_01 | Pentaxin-related gene, rapidly induced by IL-1 beta |
M31166 (external link) | 2050 | PTX3 (external link) |
| 76 | 0.756 | H002423_01 | Vascular endothelial growth factor B |
U43368 (external link) | 78781 | VEGFB (external link) |
| 77 | 0.768 | H010087_01 | Destrin (actin depolymerizing factor) |
S65738 (external link) | 82306 | ADF (external link) |
| 78 | 0.742 | H000025_01 | Neutral sphingomyelinase (N-SMase) activation associated factor |
X96586 (external link) | 78687 | NSMAF (external link) |
| 79 | 0.744 | H005560_01 | WAS protein family, member 1 | D87459 (external link) | 75850 | WASF1 (external link) |
| 80 | 0.786 | H014051_01 | Very long-chain acyl-CoA synthetase homolog 2 |
NM_012254 (external link) | 111401 | VLCS-H2 (external link) |
| 81 | 0.644 | H004741_01 | Fibroblast growth factor 13 | AF100143 (external link) | 6540 | FGF13 (external link) |
| 82 | 0.764 | H001605_01 | Annexin A4 | NM_001153 (external link) | 77840 | ANXA4 (external link) |
| 83 | 0.71 | H016019_01 | Duodenal cytochrome b | AL136693 (external link) | 31297 | FLJ23462 (external link) |
| 84 | 0.804 | H001346_01 | Inositol(myo)-1(or 4)-monophosphatase 2 |
NM_014214 (external link) | 5753 | IMPA2 (external link) |
| 85 | 0.635 | H010918_01 | WNT1 inducible signaling pathway protein 2 |
AF100780 (external link) | 194679 | WISP2 (external link) |
| 86 | 0.791 | H001101_01 | CD164 antigen, sialomucin | D14043 (external link) | 43910 | CD164 (external link) |
| 87 | 0.787 | H004431_01 | Rag C protein | AF131773 (external link) | 110950 | GTR2 (external link) |
| 88 | 0.792 | H012626_01 | Beta-2-microglobulin | AB021288 (external link) | 75415 | B2M (external link) |
| 89 | 0.805 | H002819_01 | Protective protein for beta-galactosidase (galactosialidosis) |
AL008726 (external link) | 118126 | PPGB (external link) |
| 90 | 0.684 | H002497_01 | Complement component 1, r subcomponent |
M14058 (external link) | 1279 | C1R (external link) |
| 91 | 0.691 | H006676_01 | Lung type-I cell membrane-associated glycoprotein |
AF030428 (external link) | 135150 | T1A-2 (external link) |
| 92 | 0.653 | H012777_01 | KIAA1199 protein | AB033025 (external link) | 50081 | KIAA1199 (external link) |
| 93 | 0.721 | H003789_01 | Colony stimulating factor 1 (macrophage) |
M37435 (external link) | 173894 | CSF1 (external link) |
| 94 | 0.849 | H008439_01 | SCO (cytochrome oxidase deficient, yeast) homolog 1 |
AF026852 (external link) | 14511 | SCO1 (external link) |
| 95 | 0.774 | H008994_01 | Solute carrier family 31 (copper transporters), member 2 |
U83461 (external link) | 24030 | SLC31A2 (external link) |
| 96 | 0.774 | H010497_01 | Interferon induced transmembrane protein 3 (1-8U) |
X57352 (external link) | 182241 | IFITM3 (external link) |
| 97 | 0.762 | H011175_01 | Opsin 3 (encephalopsin) | NM_014322 (external link) | 279926 | OPN3 (external link) |
| 98 | 0.701 | H011671_01 | Short-chain dehydrogenase/reductase 1 |
AF061741 (external link) | 17144 | SDR1 (external link) |
| 99 | 0.767 | H002804_01 | Prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal fami |
U29185 (external link) | 74621 | PRNP (external link) |
| 100 | 0.792 | H002258_01 | UDP-glucose pyrophosphorylase 2 | U27460 (external link) | 77837 | UGP2 (external link) |
| 101 | 0.659 | H001491_01 | Cyclin T2 | AF048731 (external link) | 155478 | CCNT2 (external link) |
| 102 | 0.762 | H002746_01 | TNF receptor-associated factor 5 | AB000509 (external link) | 29736 | TRAF5 (external link) |
| 103 | 0.766 | H013070_01 | Sarcoglycan, epsilon | AJ000534 (external link) | 110708 | SGCE (external link) |
| 104 | 0.761 | H001062_01 | N-acylsphingosine amidohydrolase (acid ceramidase) |
U70063 (external link) | 75811 | ASAH (external link) |
| 105 | 0.814 | H002694_01 | Glutathione peroxidase 4 (phospholipid hydroperoxidase) |
X71973 (external link) | 2706 | GPX4 (external link) |
| 106 | 0.774 | H011917_01 | Sorting nexin 3 | AF034546 (external link) | 12102 | SNX3 (external link) |
| 107 | 0.754 | H006813_01 | Homo sapiens cDNA FLJ11309 fis, clone PLACE1010076 |
AK002171 (external link) | 28005 | |
| 108 | 0.821 | H002793_01 | Antigen identified by monoclonal antibodies 12E7, F21 and O13 |
M16279 (external link) | 177543 | MIC2 (external link) |
| 109 | 0.844 | H000474_01 | Testis-specific kinase 1 | D50863 (external link) | 79358 | TESK1 (external link) |
| 110 | 0.731 | H000930_01 | Low density lipoprotein receptor (familial hypercholesterolemia) |
L00352 (external link) | 213289 | LDLR (external link) |
| 111 | 0.802 | H009135_01 | Electron-transferring-flavoprotein dehydrogenase |
S69232 (external link) | 323468 | ETFDH (external link) |
| 112 | 0.767 | H008544_01 | Atrophin-1 interacting protein 1; activin receptor interacting protein 1 |
AB014605 (external link) | 22599 | KIAA0705 (external link) |
| 113 | 0.789 | H000400_01 | Growth arrest-specific 6 | L13720 (external link) | 78501 | GAS6 (external link) |
| 114 | 0.762 | H016469_01 | MEK partner 1 | NM_021970 (external link) | 6361 | MP1 (external link) |
| 115 | 0.731 | H002820_01 | Ectodermal-neural cortex (with BTB-like domain) |
AF059611 (external link) | 104925 | ENC1 (external link) |
| 116 | 0.75 | H016592_01 | Hypothetical protein FLJ12816 | NM_022060 (external link) | 9175 | FLJ12816 (external link) |
| 117 | 0.792 | H006873_01 | CGI-149 protein | NM_016079 (external link) | 189658 | LOC51652 (external link) |
| 118 | 0.592 | H002066_01 | Aldehyde dehydrogenase 1 family, member A1 |
M31994 (external link) | 76392 | ALDH1A1 (external link) |
| 119 | 0.689 | H013490_01 | H.sapiens polyA site DNA | Z24724 (external link) | 4934 | |
| 120 | 0.76 | H015305_01 | Hypothetical protein FLJ22029 | NM_024949 (external link) | 285243 | FLJ22029 (external link) |
| 121 | 0.704 | H002566_01 | Membrane metallo-endopeptidase (neutral endopeptidase, enkephalinase, CALLA, CD10) |
NM_007289 (external link) | 1298 | MME (external link) |
| 122 | 0.81 | H002169_01 | Sortilin-related receptor, L(DLR class) A repeats-containing |
NM_003105 (external link) | 278571 | SORL1 (external link) |
| 123 | 0.88 | H003649_01 | Protein tyrosine phosphatase, non-receptor type 6 |
X62055 (external link) | 63489 | PTPN6 (external link) |
| 124 | 0.744 | H011942_01 | Activating transcription factor 5 | AB021663 (external link) | 9754 | ATF5 (external link) |
| 125 | 0.806 | H007715_01 | KIAA1091 protein | AL117448 (external link) | 26797 | KIAA1091 (external link) |
| 126 | 0.823 | H012019_01 | Epithelial protein lost in neoplasm beta |
NM_016357 (external link) | 10706 | EPLIN (external link) |
| 127 | 0.838 | H010079_01 | Hypothetical protein FLJ10337 | AB037858 (external link) | 173484 | KIAA1437 (external link) |
| 128 | 0.772 | H003031_01 | Glycoprotein A repetitions predominant |
Z24680 (external link) | 151641 | GARP (external link) |
| 129 | 0.762 | H002785_01 | Serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1 |
X54486 (external link) | 151242 | SERPING1 (external link) |
| 130 | 0.631 | H000082_01 | Deiodinase, iodothyronine, type II | NM_013989 (external link) | 154424 | DIO2 (external link) |
| 131 | 0.755 | H007381_01 | Hypothetical protein FLJ10044 | AK000906 (external link) | 127273 | FLJ10044 (external link) |
| 132 | 0.699 | H014982_01 | Tuftelin 1 | NM_020127 (external link) | 283009 | TUFT1 (external link) |
| 133 | 0.813 | H003637_01 | Protein tyrosine phosphatase, non-receptor type 12 |
M93425 (external link) | 62 | PTPN12 (external link) |
| 134 | 0.821 | H002684_01 | Bone morphogenetic protein 6 | NM_001718 (external link) | 285671 | BMP6 (external link) |
| 135 | 0.847 | H001078_01 | ATPase, Na+/K+ transporting, beta 3 polypeptide |
NM_001679 (external link) | 76941 | ATP1B3 (external link) |
| 136 | 0.785 | H009413_01 | KIAA0321 protein | AB002319 (external link) | 8663 | KIAA0321 (external link) |
| 137 | 0.806 | H003439_01 | Protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform |
M60484 (external link) | 80350 | PPP2CB (external link) |
| 138 | 0.811 | H011488_01 | UDP-Gal:beta GlcNAc beta 1,4- galactosyltransferase, polypeptide 5 |
AL035683 (external link) | 107526 | B4GALT5 (external link) |
| 139 | 0.631 | H002334_01 | Cytochrome P450, subfamily I (dioxin-inducible), polypeptide 1 (glaucoma 3, primary infantile) |
U03688 (external link) | 154654 | CYP1B1 (external link) |
| 140 | 0.797 | H006973_01 | Homo sapiens cDNA FLJ10598 fis, clone NT2RP2004841 |
AK001460 (external link) | 170873 | |
| 141 | 0.737 | H008497_01 | Amyloid beta (A4) precursor-like protein 2 |
NM_016160 (external link) | 279518 | APLP2 (external link) |
| 142 | 0.802 | H000517_01 | Phorbol-12-myristate-13-acetate-induced protein 1 |
D90070 (external link) | 96 | PMAIP1 (external link) |
| 143 | 0.799 | H007506_01 | Clock (mouse) homolog | AB002332 (external link) | 50722 | CLOCK (external link) |
| 144 | 0.831 | H002305_01 | Accessory proteins BAP31/BAP29 | S74039 (external link) | 291904 | DXS1357E (external link) |
| 145 | 0.813 | H002571_01 | Meiotic recombination (S. cerevisiae) 11 homolog B |
AF022778 (external link) | 202379 | MRE11B (external link) |
| 146 | 0.795 | H002782_01 | Wee1+ (S. pombe) homolog | X62048 (external link) | 75188 | WEE1 (external link) |
| 147 | 0.814 | H002076_01 | Interleukin-1 receptor-associated kinase 1 |
L76191 (external link) | 182018 | IRAK1 (external link) |
| 148 | 0.82 | H000048_01 | PRKC, apoptosis, WT1, regulator | U63809 (external link) | 176090 | PAWR (external link) |
| 149 | 0.578 | H005801_01 | Purkinje cell protein 4 | U52969 (external link) | 80296 | PCP4 (external link) |
| 150 | 0.834 | H002311_01 | Transcription factor 7-like 2 (T-cell specific, HMG-box) |
Y11306 (external link) | 173638 | TCF7L2 (external link) |
| 151 | 0.774 | H008367_01 | KIAA0623 gene product | AB014523 (external link) | 151406 | KIAA0623 (external link) |
| 152 | 0.809 | H005443_01 | Interferon-related developmental regulator 1 |
AC005192 (external link) | 7879 | IFRD1 (external link) |
| 153 | 0.796 | H005941_01 | Hypothetical protein FLJ20043 | AK000050 (external link) | 103853 | FLJ20043 (external link) |
| 154 | 0.731 | H009185_01 | KIAA1144 protein | AB032970 (external link) | 22675 | KIAA1144 (external link) |
| 155 | 0.737 | H011708_01 | Homo sapiens clone 24405 mRNA sequence |
AF070632 (external link) | 23729 | |
| 156 | 0.848 | H016365_01 | Core1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase |
NM_020156 (external link) | 46744 | C1GALT1 (external link) |
| 157 | 0.763 | H010122_01 | Homo sapiens mRNA; cDNA DKFZp586F1223 (from clone DKFZp586F1223) |
AL050204 (external link) | 28540 | |
| 158 | 0.71 | H002475_01 | Pim-1 oncogene | M54915 (external link) | 81170 | PIM1 (external link) |
| 159 | 0.794 | H007334_01 | SH3 domain binding glutamic acid-rich protein like |
AF042081 (external link) | 14368 | SH3BGRL (external link) |
| 160 | 0.817 | H000893_01 | Major histocompatibility complex, class I, E |
X56841 (external link) | 181392 | HLA-E (external link) |
| 161 | 0.737 | H010951_01 | LIM domain only 4 | NM_006769 (external link) | 3844 | LMO4 (external link) |
| 162 | 0.846 | H001759_01 | Chloride channel 7 | AL031600 (external link) | 80768 | CLCN7 (external link) |
| 163 | 0.845 | H001612_01 | RAP1, GTP-GDP dissociation stimulator 1 |
AF237413 (external link) | 7940 | RAP1GDS1 (external link) |
| 164 | 0.753 | H007858_01 | Glutaminyl-peptide cyclotransferase (glutaminyl cyclase) |
X71125 (external link) | 79033 | QPCT (external link) |
| 165 | 0.808 | H002897_01 | Cathepsin L | X12451 (external link) | 78056 | CTSL (external link) |
| 166 | 0.84 | H004099_01 | Phosphatidic acid phosphatase type 2A |
AF014403 (external link) | 41569 | PPAP2A (external link) |
‘Observed v. Expected’ table of GO classes and parent classes, in list of 166 genes shown above:
Only GO classes and parent classes with at least 5 observations in the selected subset and with an ‘Observed vs. Expected’ ratio of at least 2 are shown.
Cellular Component
| GO id | GO classification | Observed in selected subset |
Expected in selected subset |
Observed/ Expected |
|---|---|---|---|---|
| 0005887 | integral to plasma membrane | 19 | 9.37 | 2.03 |
Molecular Function
| GO id | GO classification | Observed in selected subset |
Expected in selected subset |
Observed/ Expected |
|---|---|---|---|---|
| 0016791 | phosphoric monoester hydrolase activity | 6 | 2.04 | 2.94 |
| 0005489 | electron transporter activity | 7 | 2.54 | 2.76 |
| 0042578 | phosphoric ester hydrolase activity | 6 | 2.4 | 2.5 |
| 0004713 | protein-tyrosine kinase activity | 5 | 2.16 | 2.31 |
Biological Process
| GO id | GO classification | Observed in selected subset |
Expected in selected subset |
Observed/ Expected |
|---|---|---|---|---|
| 0007600 | sensory perception | 6 | 1.92 | 3.13 |
| 0009581 | detection of external stimulus | 6 | 2.13 | 2.82 |
| 0006812 | cation transport | 6 | 2.93 | 2.05 |
