SNNAP Links and Resources

Berkeley Madonna
Genesis A general purpose simulation platform which was developed to support the simulation of neural systems ranging from complex models of single neurons to simulations of large networks made up of more abstract neuronal components.
Gepasi A software package for modeling biochemical systems. It simulates the kinetics of systems of biochemical reactions and provides a number of tools to fit models to data, optimize any function of the model, perform metabolic control analysis and linear stability analysis.
NEST Initiative
(formerly Bliss / Synod)
The website describes the SYNOD program which is a tool for simulating biologically oriented neuronal networks.
Neuron a simulation environment for developing and exercising models of neurons and networks of neurons.
NeuronC The website describes the NeuronC, a neural circuit simulation language that allows a user to construct a realistic biophysically-based model of a neural circuit (1 to 10,000 neurons) and simulate a physiology experiment on it.
Neuroscience Research Center The Neuroscience Research Center (NRC), located at The University of Texas Health Science Center at Houston, is a university-wide center where diverse and multidisciplinary research is conducted to further the understanding of neural and behavioral disorders.
XPP XPP is a tool for solving differential equations, difference equations, delay equations, functional equations, boundary value problems, and stochastic equations.